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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794332.1_cds_XP_016438097.1_3294
CDS Infomation

[gene=LOC107764086] [db_xref=GeneID:107764086] [protein=type I inositol polyphosphate 5-phosphatase 5-like] [protein_id=XP_016438097.1] [location=join(15134..15289,15386..15473,15589..15663,16438..16525,16620..16724,16806..17331,17732..17925,18650..18758,19067..19215,20015..20240)] [gbkey=CDS]
Sequence

ATGACGTCGCCAACAAGGCGTTGTAAATCTGATGATAACATCCACATGATTAAGGCAGCC
GCCGTCAACACCACCGCCGGCGGCGGCGCTAGCACTTCCCCTAGCAGCTCCCCAGCCACC
ACCCCTGACAATTCTGTTAAGGGTGAAAAAAAGAAGTGTATCATCCCAAAGCTCTTTAGT
TCCAAAAGAAGCAGTATAGGAAGCTATGAGGAGGATCTAACACAATCAGATAACAATGAT
CAAGAAATGGATTGGAAGATTATATCAAGGAGAAAAGCTTTTCTTGAAACGTCTGCTACA
GTGAAGAGAAGTTTCTCAGAAAGGCATAATAGTGCACGGATTGAAGGCCTAAATCTTTCG
ACATTTGATCATTCCACCGCACCTGCTACTATGATTAAAAGTATTAGGGTTTTTGCCGGG
ACATGGAATGTAGGAGGAAAAACTCCTAATCATGGACTTAATCTTGAAGATTTCTTGCAA
GTTGAAGGTTCAGCAGACGTATATGTATTGGGGTTTCAAGAAATTGTTCCATTAAATGCA
GGAAATGTATTAGTGAGTGAAGATAGTGAGCCAGCAGCAAGATGGTTAGCCCTCATAAGC
CATGCATTAAACAAATCATATCATGAATCAGTCCATTCTTGTGATTCAAGCTCCCATAAT
TCAAAACATTCAAAGGACTCAAAATCCAATTCTTTTCATAAACATTCTCTTAAAAGCCTT
AGCAAGAGTTTAAGGGCTAATAGTACCATTCTCAAGACCTGTAATTGCCCTTTAGAGTCA
ACAACAACAAGGCGTCAAAGAAAGCTGAGTGATCCTTCTTGTTCTCCCTTGAACCATCAT
CGCGATTCGAGTGAAGAAGATTTACAATCAATTGCAGAATTTCCTTCTTCTAATGGTTTG
AGTTATAATCTCATAGCGAGTAAGCAAATGGTGGGGATTTTCCTTTCAGTTTGGGCACGA
AAAGAGTTAGCACATCATATTGGCCATCTCAGAATATCTTCTCTTGGAAGAGGTATCATG
GGTTGTCTTGGAAACAAGGGGTGTATAGCAATAAGCATGTCACTGTATCGAACGAGCTTT
TGCTTTGTGTGCAGTCACTTGGCTTCTGGGGAGAAAGAAGGGGATGAGCTGAGAAGAAAT
GCTGATGTTGCTGAGATTCTCAAAAGCATACAATTTTCGAGAATTTGTACGGCTCCAGAC
AGCCGAATGGCAGAGAAAATTAGTGATCATGACCGTGTGATATGGCTTGGAGACTTGAAC
TACCGAGTGTCTTTGAGCTATGAGGAAACAAGACTTTTGTTAGAGGATAATGACTGGGAC
TCTCTTCTGGAAAAGGATCAGCTGAATGTGGAGAGAGAAGCAGGAAGAGTATTCAGTGGG
TGGAATGAAGGCAAGATCTTCTTTGCCCCAACTTATAAGTACTCTCATAATTCAGATTCC
TATGCCGGAGAGACTACCAAATCAAAGAAGAAACGTCGAACCCCTGCATGGTGTGATAGA
ATATTATGGCGAGGCGAGGGTATTGAACTATTATCTTATATTCGAGGGGAGTCAAGATTT
TCAGATCATAGACCCGTTTGTGCAGTATTTGCCGTGGATGTGGAGGCAGAGGCCAACAAC
AAGAACGCAAAGTTTAGAAAGGGTTTTTCTTGCACTGCTACTAGGTTGGAGTATGAAGAT
TTAATACCCCTGAGACACAGTTCCTATCATTATTGA

Peptide Sequence

PEP ID

XP_016438097.1
PEP Infomation

PREDICTED: type I inositol polyphosphate 5-phosphatase 5-like [Nicotiana tabacum]
Sequence

MTSPTRRCKSDDNIHMIKAAAVNTTAGGGASTSPSSSPATTPDNSVKGEKKKCIIPKLFS
SKRSSIGSYEEDLTQSDNNDQEMDWKIISRRKAFLETSATVKRSFSERHNSARIEGLNLS
TFDHSTAPATMIKSIRVFAGTWNVGGKTPNHGLNLEDFLQVEGSADVYVLGFQEIVPLNA
GNVLVSEDSEPAARWLALISHALNKSYHESVHSCDSSSHNSKHSKDSKSNSFHKHSLKSL
SKSLRANSTILKTCNCPLESTTTRRQRKLSDPSCSPLNHHRDSSEEDLQSIAEFPSSNGL
SYNLIASKQMVGIFLSVWARKELAHHIGHLRISSLGRGIMGCLGNKGCIAISMSLYRTSF
CFVCSHLASGEKEGDELRRNADVAEILKSIQFSRICTAPDSRMAEKISDHDRVIWLGDLN
YRVSLSYEETRLLLEDNDWDSLLEKDQLNVEREAGRVFSGWNEGKIFFAPTYKYSHNSDS
YAGETTKSKKKRRTPAWCDRILWRGEGIELLSYIRGESRFSDHRPVCAVFAVDVEAEANN
KNAKFRKGFSCTATRLEYEDLIPLRHSSYHY

Transcript Sequence

Gene sequence data has not been registered.